Name: Solyc03g006100
(Exon Intron)
Length: 3756
ATGGAACATAATCAGCTTACGGGTTCTATACCATTCACAATATTCAATATTTCTAGAATTGAACTCATTGTATTTTCAAACAATAGCTTATCAGGAAATCTTCCTAATGGTTTATGCAATGGTCTTCCAATACTCAAAAGGCTTCATCTATCAATGAACGAGCTTCGTGGCCATCTGCCTACAAGCTTGTCAAATTGTTC
ACAACTACAAGTATTATCTTTAGCATTTAATGATTTTGATGGACGAATACATAGTGAAATTGGAAGATTGAGTAACTTGCAGGGATTGTATCTTCGAAAC
AACCATTTCACAGGTATATATGTTTTATCTTATGAGTGTAATTGTACTATTGTATCTAATCACCTCACATCTTTTTTATCACACATCAAAATAAATGCAG
GGATTATTCCACAAGAGATCGGAAATCTTGTTAATTTGGTGGAATTATACATGGAGGCAAACCAGATTAGCGGCTCTATCCCGATCTCCCTAATCAATAT
CTCATCGTTGGAAACTGTTTCACTATGGAGGAACAATTTCAAGGGATCCTTACCACGGGAGATTGGCAACTTAACCAAGTTGCAAGTTTTATATCTTAGC
GAAAATAGGTTTACTGGTACGTATTGAAAGTGATATATAGCAATCAATATTGAACTAGCTAGTGTTAAATTTGACAAGATTCAAAAATGAATTAATGAGA
AGATATGGTAGTTAGGAGGATAATTCTTCATTGGTAGAAAAGTCAAGATAGCACATTTTGTAGGTGAAATTTAGGTGAACCATAAATTAATTTCACTAAG
TAAATTTTGACATATTGTGATGTCAATAGTAAGAATTCACTCCTATAAATAGATAGCTCCTAATTCATTTGTAACACACCTCTTACTTGCCTTCTCATCT
CCTAAGGCATTTTTTCTTCTTTCTCTCTTGTAGTATTTCACTTGTACTCTTTTGGAGTGAAATAAATATTGGTTGGTTGTGTCCGAGGAATAGGCAAAAG
AAAATAAAAGTTTGCCGAATCTCGTTAATTCCTGACGTTCTTTTGTTGTTGTCTCATTTACTATTTATTAGCTACATTTAGATATAGTAGTTATGATTCC
ATCAGTCTCTATATATTCGGCTTCCGCAACAGCTAGCTAGCTCATTCACTGTTCATGTGTTGACAGGTGAAATACCCAAAGAGATGAGCAATCTCGTTGA
GTTGCAGGTACTTGCTCTTGGGCTTAATAGTTTTAGTGGTTTGCTTCCAATGGAGATCTTCAACATATCGCGACTGAGAATAATTCAACTTTCAGGCAAT
ACTCTATCGGCAACTCTACCACCAAACATAGGTTCTACCTTACCCAACATCGAAGTGCTTTCTATGGGTCTCTTAACCAATCTTGTTGGGACTATTCCTC
ATTCTATCTCCAATTGTTCAAAGCTGACTATACTAGAACTTTCACGTAACAAACTCAGTGGCTTAATACCCAGTTCTCTTGGATATTTGACTCATTTAAA
CTTCCTAAACTTGTGGGGAAACAATTTAACCAGTGATTCATTTTTAAGCTTCCTCACTTCCTTAACCAATTGCAGAAATTTAAATTTTCTTTCTCTGTCT
TTCAACCCTCTAAATGCCATGCTTCCGGTCTCCGTAGGGAACTTCTCCAAATCTCTTGTAAAGTTTGATGCCAGTGAATGCAACATCAAAGGAAAGATTC
CAAATGAAGTTGGAAACTTAAGCAGCTTGTTAGACCTTCATCTTTCTGATAATAACTTCATTGGATCAATTCCTACATCAATTGGCAACTTGAGAAACAT
TCAGTACTTCAACTTGAACCACAACAATCTTACAGGATTTATTGGAGATAACATTTGTAAATTGCAGTATTTGAGTGAAATTTACTTGGGACAAAATCAA
CTTTCAGGATCTCTTCCTAATTGTTTAGGGAATGTTACTTCCCTTAGATGGATATATCTTGCTTCCAATAAATTGAGTTCCAATTTACCAACAAGCTTAG
GAAATCTTAAAGATTTACTAGTTCTTGACTTATCATCAAACAACATGGTTGGCTCTTTACCTCCGGAAATTGGATATCTAAAGGCTGCAATATATATGAA
TCTGTCAATGAATCAATTCACAAATGGAATTCCTACAGAAATTGGAGGATTGCAAAATCTGGAGCACCTTTATTTGAGACACAACAAGTTGCAAGGATCA
ATACCTGACTCAATGAACAACATGGTAAGTTTGGAATACCTAGACATTTCTCATAATAATATATCGGGAACTATTCCCATGTCTTTGGAGAAACTACAAT
ACCTCGAGTATTTCAATGTTTCTGACAACAAATTGTATGGTGAAATACCCTCGGGGGGTCCTTTCAAGAACCTCTCCAGTCTGTTTTTCATCAACAATGA
AGCATTGTGTGGTTTGTCAAGGTTTAATGTCCCACCATGCCCCACATCATCAACGCATAGATCAAATAGGAACAAACTGCTACTGCTACTTCTTGTGCTG
GGAATTGCACTTGTATTTGTTCCTGTTACCTTTGTGTTCCTATGGATAAAGCATAGAAGAGGTAAAAGAGATCCTCAACAAGCTGATTCATTGCCTATGG
CAACATTGGAAAGAATTTCATACTATGAACTGCTCCAAGCTACTGATTCGCTTAGCGACAGTAATCTGATTGGTTCTGGAAGTTTTGGCTCTGTTTACAA
AGGCGTTCTCAGAAGTGGAACTGCCATTGCAGTTAAAGTGTTCAATCTGCAACTGGAAGCGGCATTCAAGAGTTTTGATACAGAATGTGAAGTGTTGTGC
AGCCTTCGCCACAGGAATCTCGTGAAAGTCATCACTAGTTGCTCCAACCTGGATTTTAAGGCTTTAGTGCTCGAGTATATGCCTAATGGAAGTCTTGACA
AGTATTTGTATTCGCACAACTACTTCCTAGATATCAGCCAGAGACTAAGCATTATGATAGATGTGGCATGTGCTTTGGAATATCTTCACCACGGATGCTC
CTCGCCCGTGATTCACTGTGATCTAAAGCCCAGTAACATCTTGTTGGATGAGGATATGGTTGCTCACCTAGGTGACTTTGGTATTTCAAAACTGCTTGGT
GAAGATGAGAGTGATTTATACACAAAAACCTTAGCAACATTTGGTTATATTGCACCGGGTACGTCTCTTTGTTTTTGCTAATTTGAGCATTGATTTTTCA
TCTTTTTTTTTCCAAATCAAGAAAGTATATTGCATCTTTTAATTAATTGTTTGACTGTAGAGTATGGACTGGATGGACTGGTGTCGATAAAATGTGATGT
CTACAGTTACGGGATTATGTTGCTGGAAACATTTACCAGGAGAAAGCCTAGTGAGTTTGAGGGAGATCTTAGCTTGAAGCAATGGGTGAGTTATTCACTC
CCAGAGGCAGTAATGAACGTTGTAGATGCCAATTTGGTAACACCAATGGATCATCGCTTACAGAAGAAGCTAGATGTTGTGGCATCAATCATGAAAGTGG
CATTAGATTGTTGTGCTGAATCTCCGGCAACAAGGACAAACATGAAAGATGTTGTAGGGATGCTAGAGAAGATCATGATTCAACTTCTTGCACGCTGAGC
ATGTTATCGGAATCTCTTTTTCCAAATTGATTGCTTGTTTGTTTTATGGGAAGAATATTGCTTTTTTTGTTTTAGCATTTTGATTCTGTTTTCAGAAATG
CTAGTTGGTTGCAATAAATGTCACTGTTTCCTCTTAAAAACTAAAACCAAATTGAT
The mutation and phenotype for selected feature: Solyc03g006100
Project Name:Using CRISPR/Cas9 to understand and improve the plant immune system (NSF-IOS 1546625)
Diseases of crop plants have major economic and environmental impacts because they decrease yields, reduce marketability of produce and require extensive pesticide applications. The overarching goal o...... Lab: Martin Lab ; Contact: Gregory Martin: gbm7@cornell.edu| Transformation | Genetic background | Construct | gRNA | Plant | Mutation | Phenotype |
|---|---|---|---|---|---|---|
| CRT0137 | M82 sp+ | CTG0137-10 | CGR0137-10 | CRT0137-8 (T0 ) | -1 bp/-5 bp | Morphology : Serrated cotyledons |
| CRT0137 | M82 sp+ | CTG0137-10 | CGR0137-10 | CRT0137-8-2 (T1 ) | -1 bp/-5 bp | Morphology : Serrated cotyledons |
| CRT0137 | M82 sp+ | CTG0137-10 | CGR0137-10 | CRT0137-8-3 (T1 ) |
-5 bp/-5 bp
Is tDNA present: No
Mutation sequence: ACTGCCATTGCAGTTAAAGTGTTCAATCTGCAACTGGAAGCGGCATTCAAGAGTTTTGATACAGAATGTGAAGTGTTGTG CAGCCTTCGCCACAGGAATCTCGTGAAAGTCATCACTAGTTGCTCCAACCTGGATTTTAAGGCTTTAGTGCTCGAGTATA TGCCTAATGGAAGTCTTGACAAGTATTTGTATTCGCACAACTACTTCCTAGATATCAGCCAGAGACTAAGCATTATGATA GATGTGGCATGTGCTTTGGAATAACCACGGATGCTCCTCGCCCGTGATTCACTGTGATCTAAAGCCCAGTAACATCTTGT TGGATGAGGATATGGTTGCTCACCTAGGTGACTTTGGTATTTCAAAACTGCTTGGTGAAGATGAGAGTGATTTATACACA AAAACCTTAGCAACATTTGGTTATATTGCACCGGGTACGTCTCTTTGTTTTTGCTAATTTGAGCATTGATTTTTCATCTT TTT Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
Morphology : Serrated cotyledons |
| CRT0137 | M82 sp+ | CTG0137-10 | CGR0137-10 | CRT0137-8-3-1 (T2 ) |
-5 bp/-5 bp
Is tDNA present: No
Mutation sequence: ACTGCCATTGCAGTTAAAGTGTTCAATCTGCAACTGGAAGCGGCATTCAAGAGTTTTGATACAGAATGTGAAGTGTTGTG CAGCCTTCGCCACAGGAATCTCGTGAAAGTCATCACTAGTTGCTCCAACCTGGATTTTAAGGCTTTAGTGCTCGAGTATA TGCCTAATGGAAGTCTTGACAAGTATTTGTATTCGCACAACTACTTCCTAGATATCAGCCAGAGACTAAGCATTATGATA GATGTGGCATGTGCTTTGGAATAACCACGGATGCTCCTCGCCCGTGATTCACTGTGATCTAAAGCCCAGTAACATCTTGT TGGATGAGGATATGGTTGCTCACCTAGGTGACTTTGGTATTTCAAAACTGCTTGGTGAAGATGAGAGTGATTTATACACA AAAACCTTAGCAACATTTGGTTATATTGCACCGGGTACGTCTCTTTGTTTTTGCTAATTTGAGCATTGATTTTTCATCTT TTT Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
|
| CRT0137 | M82 sp+ | CTG0137-10 | CGR0137-10 | CRT0137-8-3-3 (T2 ) |
-5 bp/-5 bp
Is tDNA present: No
Mutation sequence: ACTGCCATTGCAGTTAAAGTGTTCAATCTGCAACTGGAAGCGGCATTCAAGAGTTTTGATACAGAATGTGAAGTGTTGTG CAGCCTTCGCCACAGGAATCTCGTGAAAGTCATCACTAGTTGCTCCAACCTGGATTTTAAGGCTTTAGTGCTCGAGTATA TGCCTAATGGAAGTCTTGACAAGTATTTGTATTCGCACAACTACTTCCTAGATATCAGCCAGAGACTAAGCATTATGATA GATGTGGCATGTGCTTTGGAATAACCACGGATGCTCCTCGCCCGTGATTCACTGTGATCTAAAGCCCAGTAACATCTTGT TGGATGAGGATATGGTTGCTCACCTAGGTGACTTTGGTATTTCAAAACTGCTTGGTGAAGATGAGAGTGATTTATACACA AAAACCTTAGCAACATTTGGTTATATTGCACCGGGTACGTCTCTTTGTTTTTGCTAATTTGAGCATTGATTTTTCATCTT TTT Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
|
| CRT0137 | M82 sp+ | CTG0137-10 | CGR0137-10 | CRT0137-8-3-4 (T2 ) |
-5 bp/-5 bp
Is tDNA present: No
Mutation sequence: ACTGCCATTGCAGTTAAAGTGTTCAATCTGCAACTGGAAGCGGCATTCAAGAGTTTTGATACAGAATGTGAAGTGTTGTG CAGCCTTCGCCACAGGAATCTCGTGAAAGTCATCACTAGTTGCTCCAACCTGGATTTTAAGGCTTTAGTGCTCGAGTATA TGCCTAATGGAAGTCTTGACAAGTATTTGTATTCGCACAACTACTTCCTAGATATCAGCCAGAGACTAAGCATTATGATA GATGTGGCATGTGCTTTGGAATAACCACGGATGCTCCTCGCCCGTGATTCACTGTGATCTAAAGCCCAGTAACATCTTGT TGGATGAGGATATGGTTGCTCACCTAGGTGACTTTGGTATTTCAAAACTGCTTGGTGAAGATGAGAGTGATTTATACACA AAAACCTTAGCAACATTTGGTTATATTGCACCGGGTACGTCTCTTTGTTTTTGCTAATTTGAGCATTGATTTTTCATCTT TTT Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
This database is supported by NSF (IOS-1546625) and hosted by BTI.
