Name: Solyc03g116690
(Exon Intron)
Length: 763
ATGTACAAAATGATGTGTGTAATCGTCTTTGGTGTTTTAGCCGTTGCAAATATGATGCAAGATGCAACAGCTCAAACGGTGCATGTGGTTGGGGACACCATGAGTTGGATCGTACCAAGCAATAGCGCGGCAGCTTATACAAATTGGGCTGCTGGGAAAACCTTCAGCGTGGGTGACATTCTAGGTATGTGTATTTAGTT
AATCAATTTCCATTTTTTGATATCCTTCAGCTTATTTTGTATCAACACACATCCAAAGTCTGATTATGTTACTTTCCGTATTTTATACAGTATTCAATTT
CATGACCGGCCGACATGACGTGCTGCAAGTAGAAAAAACATCGTTCGATGGTTGCAATTCACAGAATGCCATTGGGAGTGCTATAATGACAGGACCAGCC
AATATGACTCTAAACTCTACCGGAGAACACTACTATATTTGCACTTTTGGTATGCACTGCATAAATGGCCAGAAATTAGCTATTACAGTTTCGAACAGCA
CTGCAACTCCAGGAGCCAACCCTCCTGTTGTACGACAACCAGAAGCTTGTGCACCTACACCCTCTGCTGCAGGACCTTCAAATTCTGTTCCAGGTGGTCG
TGCTCCTCCTCCTACACCTTCGTCCTCAACGACTGTGTTGGCCAGTTTTGTAATCAGTCTGACCGCCATTGCCTTGGCCTCTTTACTTTAAATTGGGCAT
ATTAAGGAGGTTTTTTAGCATCGTGTAATGGATAATTCTTATATATATATATTTTTTGGTTTA
The mutation and phenotype for selected feature: Solyc03g116690
Project Name:Using CRISPR/Cas9 to understand and improve the plant immune system (NSF-IOS 1546625)
Diseases of crop plants have major economic and environmental impacts because they decrease yields, reduce marketability of produce and require extensive pesticide applications. The overarching goal o...... Lab: Martin Lab ; Contact: Gregory Martin: gbm7@cornell.edu| Transformation | Genetic background | Construct | gRNA | Plant | Mutation | Phenotype |
|---|---|---|---|---|---|---|
| CRT0062 | RG-PtoR | CTG0062-1 | CGR0062-1 | CRT0062-1 (T0 ) |
-7 bp/-7 bp
Is tDNA present: Yes
Mutation sequence: CCCTTCTCTTATATATACAGAACCATATTGTCTATCTGGGCATCTCATTCTACCCTGAGTAACTGGATAGGTAACAATCA TCAACTTCCTCAGTTGTGACACATATCGAAAAATTTTACCAAAAACTTAAACATGTACAAAATGATGTGTGTAATCGTCT TTGGTGTTTTAGCCGTTGCAAATATGATGCAAGATGCAACAGCTCAAACGGTGCATGTGGTTGGGGACACCATGAGTTGG ATCGTACTAGCGCGGCAGCTTATACAAATTGGGCTGCTGGGAAAACCTTCAGCGTGGGTGACATTCTAGGTATGTGTATT TAGTTAATCAATTTCCATTTTTTGATATCCTTCAGCTTATTTTGTATCAACACACATCCAATGTCTGATTATGTTACTTT CCGTATTTTATACAGTATTCAATTTCATGACCGGCCGACATGACGTGCTGCAAGTAGAAAAAACATCGTTCGATGGTTGC AATTCACAGAATGCCATTGGGAGTGCTATAATGACAGGACCAGCCAATATGACTCTAAACTCTACCGGAGAACACTACTA TATTTGCACTTTTGGTATGCACTGCATAAATGGCCAGAAATTAGCTATTACAGTTTCGAACAGCACTGCAACTCCAGGAG CCAACCCTCCTGTTGTACGACAACCAGAAGCTTGTGCACCTACACCCTCTGCTGCAGGACCTTCA Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
|
| CRT0062 | RG-PtoR | CTG0062-1 | CGR0062-1 | CRT0062-1-1 (T1 ) |
-7 bp/-7 bp
Is tDNA present: No
Mutation sequence: CCCTTCTCTTATATATACAGAACCATATTGTCTATCTGGGCATCTCATTCTACCCTGAGTAACTGGATAGGTAACAATCA TCAACTTCCTCAGTTGTGACACATATCGAAAAATTTTACCAAAAACTTAAACATGTACAAAATGATGTGTGTAATCGTCT TTGGTGTTTTAGCCGTTGCAAATATGATGCAAGATGCAACAGCTCAAACGGTGCATGTGGTTGGGGACACCATGAGTTGG ATCGTACTAGCGCGGCAGCTTATACAAATTGGGCTGCTGGGAAAACCTTCAGCGTGGGTGACATTCTAGGTATGTGTATT TAGTTAATCAATTTCCATTTTTTGATATCCTTCAGCTTATTTTGTATCAACACACATCCAATGTCTGATTATGTTACTTT CCGTATTTTATACAGTATTCAATTTCATGACCGGCCGACATGACGTGCTGCAAGTAGAAAAAACATCGTTCGATGGTTGC AATTCACAGAATGCCATTGGGAGTGCTATAATGACAGGACCAGCCAATATGACTCTAAACTCTACCGGAGAACACTACTA TATTTGCACTTTTGGTATGCACTGCATAAATGGCCAGAAATTAGCTATTACAGTTTCGAACAGCACTGCAACTCCAGGAG CCAACCCTCCTGTTGTACGACAACCAGAAGCTTGTGCACCTACACCCTCTGCTGCAGGACCTTCA Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
|
| CRT0062 | RG-PtoR | CTG0062-1 | CGR0062-1 | CRT0062-1-3 (T1 ) |
-7 bp/-7 bp
Is tDNA present: No
Mutation sequence: CCCTTCTCTTATATATACAGAACCATATTGTCTATCTGGGCATCTCATTCTACCCTGAGTAACTGGATAGGTAACAATCA TCAACTTCCTCAGTTGTGACACATATCGAAAAATTTTACCAAAAACTTAAACATGTACAAAATGATGTGTGTAATCGTCT TTGGTGTTTTAGCCGTTGCAAATATGATGCAAGATGCAACAGCTCAAACGGTGCATGTGGTTGGGGACACCATGAGTTGG ATCGTACTAGCGCGGCAGCTTATACAAATTGGGCTGCTGGGAAAACCTTCAGCGTGGGTGACATTCTAGGTATGTGTATT TAGTTAATCAATTTCCATTTTTTGATATCCTTCAGCTTATTTTGTATCAACACACATCCAATGTCTGATTATGTTACTTT CCGTATTTTATACAGTATTCAATTTCATGACCGGCCGACATGACGTGCTGCAAGTAGAAAAAACATCGTTCGATGGTTGC AATTCACAGAATGCCATTGGGAGTGCTATAATGACAGGACCAGCCAATATGACTCTAAACTCTACCGGAGAACACTACTA TATTTGCACTTTTGGTATGCACTGCATAAATGGCCAGAAATTAGCTATTACAGTTTCGAACAGCACTGCAACTCCAGGAG CCAACCCTCCTGTTGTACGACAACCAGAAGCTTGTGCACCTACACCCTCTGCTGCAGGACCTTCA Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
|
| CRT0062 | RG-PtoR | CTG0062-1 | CGR0062-1 | CRT0062-2 (T0 ) | -1 bp (49.3%); -6 bp (46.7%) | |
| CRT0062 | RG-PtoR | CTG0062-1 | CGR0062-1 | CRT0062-2-2 (T1 ) |
-1 bp/-1 bp
Is tDNA present: No
Mutation sequence: TACAGAACCATATTGTCTATCTGGGCATCTCATTCTACCCTGAGTAACTGGATAGGTAACAATCATCAACTTCCTCAGTT GTGACACATATCGAAAAATTTTACCAAAAACTTAAACATGTACAAAATGATGTGTGTAATCGTCTTTGGTGTTTTAGCCG TTGCAAATATGATGCAAGATGCAACAGCTCAAACGGTGCATGTGGTTGGGGACACCATGAGTTGGATCGTACCAAGCAAT GCGCGGCAGCTTATACAAATTGGGCTGCTGGGAAAACCTTCAGCGTGGGTGACATTCTAGGTATGTGTATTTAGTTAATC AATTTCCATTTTTTGATATCCTTCAGCTTATTTTGTATCAACACACATCCAATGTCTGATTATGTTACTTTCCGTATTTT ATACAGTATTCAATTTCATGACCGGCCGACATGACGTGCTGCAAGTAGAAAAAACATCGTTCGATGGTTGCAATTCACAG AATGCCATTGGGAGTGCTATAATGACAGGACCAGCCAATATGACTCTAAACTCTACCGGAGAACACTACTATATTTGCAC TTTTGGTATGCACTGCATAAATGGCCAGAAATTAGCTATTACAGTT Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
This database is supported by NSF (IOS-1546625) and hosted by BTI.
