Name: Solyc03g118330
(Exon Intron)
Length: 2346
TCAGAAACCTGTCCTGATTATTATCAATTCCCTGTAAACTTGCTCCATGTTAATTCTCTCTTGTGGTGTTTCTGCTGAACATGCTAGCCCAAGTTGGAAAATAGAAACCAAGCACTTGATCTGTTCACTACTTATATTCTTGTTAGCATCCTCTCCTGTCATTTCTCCACAGAGAGCGAATCCGTCAACAATATCCATTA
TTTGATCTGGTAATGCCAGTCTGACGAAAAGGTGCAGAGTCACATTGTCTTGAAATAGTTTGTCTGCGGGCCTTTTTCCAGTGAAAATTCCAGAAACAGG
ATCCCATAACTATACAAATCTCCTGTTACGGCGACCTCAGCACCCATGCCATACTCTGCAGTATTCATCCATATTAGCCACTCACTCTGTAAAACGTGCA
TTTGAAACTAACCCAAGTTTTGAAGTATTTGTCAGATTTAAGTAGAGGACAATTGAAAATTGAGAAAGGATATTTACCTGGTGGGGTGTATCCAATAGTT
CCCTGTATTTCGAGTGAGCTGAATAGGTTAAGGTTGCCTTCCCCAGAAAAACTAGGGATGAGCCTGGCCAATCCAAAATCACTTACATGTGCTATCATGT
CGTCGTCGAGAAGAATATTACTTGGTTTGAGATCAGAGTGAACCACAGGGATTTCACATTGATGATGAAGATAATATAATGCAGAAGCCACGTCTATTGC
AATATTTAATCTCTGAAGAATGTTTAAGCTATTGCATTGTATTTGTCCTTCTGATTCTTGATGTAACCACTCCTCCAAGCTTCCATTTTCCATGAACTGA
TACATTCTGGCCTTAAAGTCATTTCCTTTGAAGTCAATGCTGGATCATACAGTTATGACTTTCACCAGGTTTCTATGCCGGGTATCTCTCAAGGTGTGGC
ATTCAGCCATGAAGCTTTTAGATGCACTGTGTCTTTGGAGGTTGAGTACCTTGACTGCAACTGGATTTTCATTTGATGAGTGAAGAATTCCTTTGTCGCA
GTGCCAAAACTGCCTGATTTTAACAACCTATCTGAAGAAAAACCACTAGTTGCATCATGAAGCTCCTTATATGAAATCATGGGGAAGATGAGATGCCCAG
ATGTGGATGTTGCATCTCTTTGTTTTTTGGGATCTTTTAATGAAAAACATAGAAAGCAGAAAACATGCTATTGCAGCAAATAAAATAACACCGATAATTG
CAGTCAGAATGGGTGTAAGACGCTTCCTCTTTGTTCTATGGTTTGCTTGCTTCGGTCAAGGTGGTAAATCAAACTCTTGGACTCCACCACAAAGCTTGGG
ATTCCCCTCAACTTGTAATGCGGTTGAATTTGAGAATACTCGTTGGACGGGAACCTCACCCTCTTAATAGTTGTCTGAAAGATTCAGGTACAGTAGGGAG
GAAAGATTCAGAGTCCAAGGTGGAATTTCTCCTGATAAATTGTTTCTTGAAATACGGGATGGACCCTTCAAATGAATTGCCTTGCATGTAAAGTAATTCC
AAGGCCAAACATTTGCCTATGGTGCTTGGAATCATGCCTGAGAAATTGTTGTAAGAAAGGTCAAAACCTGCAAGGTTTGTTATATCTCCTATCTCCATTG
GCAGGGAACCCATAAAAGAGTTATTAGCATGTGCTAGGGATGGAGGAACGGTTCCATTTAAAGTATTTCCAGACAAATAAAGATAGAGCAGTCTCGTGAT
ATTTCCTATTGAAGATGGGATCTCACAGCTAAATCTGTTTGAATCCAAGTTGAGAGTTCCCAAGTTTGAAAGGATTCCTATAGATGCTGGAATGCTACCC
CGTTCTACAAATTTCTTGCAGGTGAAGTATATTTAGGCTCACGAGGTCTGCAATTTTTTTCGGTATGTTCCCTCGAATCCTATTCTGTCCCATGTGTAAT
CTTTTCTATAGGGTGAACAGGTTGGTTACTGAGTTTGGAAACATGTCTCCAAAGTTGTTGTGGGCCAAAAGCAATTACTGTAGGTTGCTGCAGTTGGCCA
GGGAACTGATGAAGTTCATGTTATCCACTCGCCAACTGATTACCGTTAACGTTGAGCCACATTGAGTTCTTCACCTTTCCTTGACTTGCGCAGGTACATT
TCCAGTAAAATTGTTGCCTGGAAGATCAAGTATCTGAAGATTTGAAGCATTGACAAATGAATCTGGAAATATTCCAGTGAATCAATTCATTCCCCAGTTG
ATCTTCTCTGCTTTTGGAAAAGCAACACCGATATTGCTTCTCAGATTACCTGAGAAGTAGTTTACGACAGGCCTATGACAAATTGTAGAGTGGAGGAGGG
AACTCACCAGAAAGTTGATTGACTGATAAATCATCGAACTTCTCAT
The mutation and phenotype for selected feature: Solyc03g118330
Project Name:Using CRISPR/Cas9 to understand and improve the plant immune system (NSF-IOS 1546625)
Diseases of crop plants have major economic and environmental impacts because they decrease yields, reduce marketability of produce and require extensive pesticide applications. The overarching goal o...... Lab: Martin Lab ; Contact: Gregory Martin: gbm7@cornell.edu| Transformation | Genetic background | Construct | gRNA | Plant | Mutation | Phenotype |
|---|---|---|---|---|---|---|
| CRT0137 | M82 sp+ | CTG0137-14 | CGR0137-14 | CRT0137-4 (T0 ) | -1 bp/-2112 bp | |
| CRT0137 | M82 sp+ | CTG0137-14 | CGR0137-14 | CRT0137-4-10 (T1 ) |
-1 bp/-1 bp
Is tDNA present: No
Mutation sequence: ACACCCATTCTGACTGCAATTATCGGTGTTATTTTATTTGCTGCAATAGCATGTTTTCTGCTTTCTATGTTTTTCATTAA AAGATCCCAAAAAACAAAGAGATGCAACATCCACTCTGGGCATCTCATCTTCCCCATGATTTCATATAAGGAGCTTCATG ATGCAACTAGTGGTTTTTCTTCAGATAGGTTGTTAAAATCAGGCAGTTTTGGCACTGCGACAAAGGAATTCTTCACTCAT CAAATGAAAATCCAGTTGCAGTCAAGGTACTCAACCTCCAAAGACACAGTGCATCTAAAAGCTTCATGGCTGAATGCCAC ACCTTGAGAGATACCCGGCATAGAAACCTGGTGAAAGTCATAACTGTATGATCCAGCATTGACTTCAAA Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
|
| CRT0137 | M82 sp+ | CTG0137-14 | CGR0137-14 | CRT0137-4-10-3 (T2 ) |
-1 bp/-1 bp
Is tDNA present: Yes
Mutation sequence: ACACCCATTCTGACTGCAATTATCGGTGTTATTTTATTTGCTGCAATAGCATGTTTTCTGCTTTCTATGTTTTTCATTAA AAGATCCCAAAAAACAAAGAGATGCAACATCCACTCTGGGCATCTCATCTTCCCCATGATTTCATATAAGGAGCTTCATG ATGCAACTAGTGGTTTTTCTTCAGATAGGTTGTTAAAATCAGGCAGTTTTGGCACTGCGACAAAGGAATTCTTCACTCAT CAAATGAAAATCCAGTTGCAGTCAAGGTACTCAACCTCCAAAGACACAGTGCATCTAAAAGCTTCATGGCTGAATGCCAC ACCTTGAGAGATACCCGGCATAGAAACCTGGTGAAAGTCATAACTGTATGATCCAGCATTGACTTCAAA Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
|
| CRT0137 | M82 sp+ | CTG0137-14 | CGR0137-14 | CRT0137-4-10-3-1 (T3 ) |
-1 bp/-1 bp
Is tDNA present: No
Mutation sequence: ACACCCATTCTGACTGCAATTATCGGTGTTATTTTATTTGCTGCAATAGCATGTTTTCTGCTTTCTATGTTTTTCATTAA AAGATCCCAAAAAACAAAGAGATGCAACATCCACTCTGGGCATCTCATCTTCCCCATGATTTCATATAAGGAGCTTCATG ATGCAACTAGTGGTTTTTCTTCAGATAGGTTGTTAAAATCAGGCAGTTTTGGCACTGCGACAAAGGAATTCTTCACTCAT CAAATGAAAATCCAGTTGCAGTCAAGGTACTCAACCTCCAAAGACACAGTGCATCTAAAAGCTTCATGGCTGAATGCCAC ACCTTGAGAGATACCCGGCATAGAAACCTGGTGAAAGTCATAACTGTATGATCCAGCATTGACTTCAAA Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
|
| CRT0137 | M82 sp+ | CTG0137-14 | CGR0137-14 | CRT0137-4-10-6 (T2 ) |
-1 bp/-1 bp
Is tDNA present: Yes
Mutation sequence: ACACCCATTCTGACTGCAATTATCGGTGTTATTTTATTTGCTGCAATAGCATGTTTTCTGCTTTCTATGTTTTTCATTAA AAGATCCCAAAAAACAAAGAGATGCAACATCCACTCTGGGCATCTCATCTTCCCCATGATTTCATATAAGGAGCTTCATG ATGCAACTAGTGGTTTTTCTTCAGATAGGTTGTTAAAATCAGGCAGTTTTGGCACTGCGACAAAGGAATTCTTCACTCAT CAAATGAAAATCCAGTTGCAGTCAAGGTACTCAACCTCCAAAGACACAGTGCATCTAAAAGCTTCATGGCTGAATGCCAC ACCTTGAGAGATACCCGGCATAGAAACCTGGTGAAAGTCATAACTGTATGATCCAGCATTGACTTCAAA Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
|
| CRT0137 | M82 sp+ | CTG0137-14 | CGR0137-14 | CRT0137-4-10-6-1 (T3 ) |
-1 bp/-1 bp
Is tDNA present: No
Mutation sequence: ACACCCATTCTGACTGCAATTATCGGTGTTATTTTATTTGCTGCAATAGCATGTTTTCTGCTTTCTATGTTTTTCATTAA AAGATCCCAAAAAACAAAGAGATGCAACATCCACTCTGGGCATCTCATCTTCCCCATGATTTCATATAAGGAGCTTCATG ATGCAACTAGTGGTTTTTCTTCAGATAGGTTGTTAAAATCAGGCAGTTTTGGCACTGCGACAAAGGAATTCTTCACTCAT CAAATGAAAATCCAGTTGCAGTCAAGGTACTCAACCTCCAAAGACACAGTGCATCTAAAAGCTTCATGGCTGAATGCCAC ACCTTGAGAGATACCCGGCATAGAAACCTGGTGAAAGTCATAACTGTATGATCCAGCATTGACTTCAAA Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
|
| CRT0137 | M82 sp+ | CTG0137-14 | CGR0137-14 | CRT0137-4-2 (T1 ) | -1 bp/-2112 bp | |
| CRT0137 | M82 sp+ | CTG0137-14 | CGR0137-14 | CRT0137-4-2-1 (T2 ) |
-1 bp/-1 bp
Is tDNA present: Yes
Mutation sequence: ACACCCATTCTGACTGCAATTATCGGTGTTATTTTATTTGCTGCAATAGCATGTTTTCTGCTTTCTATGTTTTTCATTAA AAGATCCCAAAAAACAAAGAGATGCAACATCCACTCTGGGCATCTCATCTTCCCCATGATTTCATATAAGGAGCTTCATG ATGCAACTAGTGGTTTTTCTTCAGATAGGTTGTTAAAATCAGGCAGTTTTGGCACTGCGACAAAGGAATTCTTCACTCAT CAAATGAAAATCCAGTTGCAGTCAAGGTACTCAACCTCCAAAGACACAGTGCATCTAAAAGCTTCATGGCTGAATGCCAC ACCTTGAGAGATACCCGGCATAGAAACCTGGTGAAAGTCATAACTGTATGATCCAGCATTGACTTCAAA Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
|
| CRT0137 | M82 sp+ | CTG0137-14 | CGR0137-14 | CRT0137-4-2-2 (T2 ) |
-1 bp/-1 bp
Is tDNA present: Yes
Mutation sequence: ACACCCATTCTGACTGCAATTATCGGTGTTATTTTATTTGCTGCAATAGCATGTTTTCTGCTTTCTATGTTTTTCATTAA AAGATCCCAAAAAACAAAGAGATGCAACATCCACTCTGGGCATCTCATCTTCCCCATGATTTCATATAAGGAGCTTCATG ATGCAACTAGTGGTTTTTCTTCAGATAGGTTGTTAAAATCAGGCAGTTTTGGCACTGCGACAAAGGAATTCTTCACTCAT CAAATGAAAATCCAGTTGCAGTCAAGGTACTCAACCTCCAAAGACACAGTGCATCTAAAAGCTTCATGGCTGAATGCCAC ACCTTGAGAGATACCCGGCATAGAAACCTGGTGAAAGTCATAACTGTATGATCCAGCATTGACTTCAAA Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
|
| CRT0137 | M82 sp+ | CTG0137-14 | CGR0137-14 | CRT0137-4-2-2-2 (T3 ) |
-1 bp/-1 bp
Is tDNA present: Yes
Mutation sequence: ACACCCATTCTGACTGCAATTATCGGTGTTATTTTATTTGCTGCAATAGCATGTTTTCTGCTTTCTATGTTTTTCATTAA AAGATCCCAAAAAACAAAGAGATGCAACATCCACTCTGGGCATCTCATCTTCCCCATGATTTCATATAAGGAGCTTCATG ATGCAACTAGTGGTTTTTCTTCAGATAGGTTGTTAAAATCAGGCAGTTTTGGCACTGCGACAAAGGAATTCTTCACTCAT CAAATGAAAATCCAGTTGCAGTCAAGGTACTCAACCTCCAAAGACACAGTGCATCTAAAAGCTTCATGGCTGAATGCCAC ACCTTGAGAGATACCCGGCATAGAAACCTGGTGAAAGTCATAACTGTATGATCCAGCATTGACTTCAAA Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
This database is supported by NSF (IOS-1546625) and hosted by BTI.
