Name: Solyc04g014900
(Exon Intron)
Length: 2105
CACTAATTGTTTCTTTTTATTTTCACATTCACTCATTATCACATTCAAAAAAAACAAAATAGTGCAGCTAAACACCTTTAAGTAGATCATAGAGTAAAATAGGTCAAAAACCACTCAGTTGAAATTAAAAACAATAAACGACAACTATATTAAAGAAACAAAAAAGCATCATATTAGTTTGCGGCTCAGAAAACAACAAC
ATGATTTCTATGTTTCCAGAAATGTGTTGTTGATTTTGTTAAGCCTCTTTACTATATCCTTCATAGTTATTCTTGATTCTGGCGTTTCCTTTGTGCAATC
TAAAGCCAACTCAATCATGAAAGTTATGCACATTTCACTTTTACAAGTGATTTGTTTTTTCTCGGAAAAGAGATTGGCATTCACAACTTCCATCATCCTC
CCTGAAATTGATTGTGTGATCCATTTCCTCAAGTCAAGATTTTCATTGCATATCTCTTCATCTGTTGGCCTTCTTTTGATCAAGACTTCCATCAATATGA
TACCGTAGCTATAAACATCTCCACTAGCAGACACTATTCCCTCTGAGCCATATTCTTAGAAAAGGATTGAACAAAAGTTACTCAATTGAAATACAACAAT
AATTCTCCTTTTACCTCTACAACTTGGAGAGGCTTTATTAAGATAAGAAAAAATCAAAGAGAGTAGATTTTTCATACCTGGTGCAATGTATCCAAGAGTG
CCCAATGTCTCTGTATGTGCCACGGATTTGCTCACAGCTAAAATCTTAGAGATTCCAAAATCACCAACATGAGCCACCATATCTTCATCCAAAAGAATGT
TGGCTGGCTTTAAATCGCAATGAACTATTGGAGTTACATGACCATGATGTAGATATTCAACTGCCATAGCTGCATCAAGCATTACAGCGACTCTTTGATG
AAGGTTCAAGTGCCGATCTTCATTGTACAACCAATTCTCAAGACTTCCATTGGGCATAAAATGCAGAACAAAGGCTCTTATATAGTTACTAGAACATAAA
GTAATCACCGGAACAAGATTTCGGTGTCTAACATTTCTCATCACTTGGCATTTGGTATCAAACCTCTTGCATACTTGATCATTTTCCAAATCCAGAACCT
TAATAGCCACTGCAGTTCCACCAAACAATGTGCCTTTGTACACAGAGCCAGAGCTTCCCTCACCAATTAAATTGGATTCATCAAAATTATTTGTTGCTCG
TTGAATCTCCTGATAAGAAACTAATTGATGAGTCCGGATCTCCGGTATATTCTCCACATCTATGGACTTCCCTTTCTTCCGTCGTTTCATCATCCAAATT
GAAACCAACAAGAATATCAGAAAGGATGCAATAATCACTGGAATAACAATTTTTAGCAGAACCTCCGTAAGCTATTGTTTGCCAGAGCAACAGAAAGTAG
AGACGATATATTAAACAGTGTTGGAGGAATGGGACCTGTTAATTGATTATCTCTCAAGGATAAAAATGCAAGCTGGCTCAGATTACCGACCTCCGTTGGA
ATGTTGCCGCTGACTCTATTCCCAGACAAACTGAAGTTCATCATTTTTGTGGCATTTCCAACAGAAGGGGGGATTATACCGGTGAGGCTATTTTTCCTGA
GATTTAAGACTCTGAGTTGGGGTACATACCATGGCCCTCTCCACATTTCACCCAATGAAATTACTTCAACTCTACGGTTTTGAAATAGACTTGTTGGTAT
ACTTCCGTTGAGCTGATTGTTTTTAACATCAATCACTCGCAAGCGAGGCAGGTGACCAAGTCCATAAGGGATGCCACCGTGGAAGCTGTTATTCTGGAGA
TTGAGAACACTGAGGAAGGACAAATTGGCCAAAGACGGGGAAATTGTGCCTTGAAGTTGCAAATTAGGAAGATCCAAGGCAACAACCCTTTGTCTTTTTG
GAGTGCAAGTGACACCAAACCAAGAGCAAAAAGAAGGACTTTTGGTCCAATTATTGGCCAAAAAATGATTAGGAGTTGTAATGAGATTATGGAAAGCTAG
TAGAGCTCTTTGGTCAGTCTCATTTGAGGAAGAAAGCGATACAGAAAATTGAATTAGAAATAGAAGAATCAATAATAACAGAATGTTATTCTTCATGATT
GATCC
The mutation and phenotype for selected feature: Solyc04g014900
Project Name:Using CRISPR/Cas9 to understand and improve the plant immune system (NSF-IOS 1546625)
Diseases of crop plants have major economic and environmental impacts because they decrease yields, reduce marketability of produce and require extensive pesticide applications. The overarching goal o...... Lab: Martin Lab ; Contact: Gregory Martin: gbm7@cornell.edu| Transformation | Genetic background | Construct | gRNA | Plant | Mutation | Phenotype |
|---|---|---|---|---|---|---|
| CRT0137 | M82 sp+ | CTG0137-24 | CGR0137-24 | CRT0137-4 (T0 ) | -1 bp/no amplification | |
| CRT0137 | M82 sp+ | CTG0137-24 | CGR0137-24 | CRT0137-4-10 (T1 ) | No amp | |
| CRT0137 | M82 sp+ | CTG0137-24 | CGR0137-24 | CRT0137-4-10-3 (T2 ) |
-1 bp/-1 bp
Is tDNA present: Yes
Mutation sequence: GTGTTGGAGGAATGGGACCTGTTAATTGATTATCTCTCAAGGATAAAAATGCAAGCTGGCTCAGATTACCGACCTCCGTT GGAATGTTGCCGCTGACTCTATTCCCAGACAAACTGAAGTTCATCATTTTTGTGGCATTTCCAACAGAAGGGGGGATTAT ACCGGTGAGGCTATTTTTCCTGAGATTTAAGACTCTGAGTTGGGGTACATACCATGGCCCTCTCCACATTTCACCCAATG AAATTACTTCAACTCTACGGTTTTGAAATAGACTTGTTGGTATACTTCCGTTGAGCTGATTGTTTTTAACATCAATCACT CGCAAGCGAGGCAGGTGACCAAGTCCTAAGGGATGCCACCGTGGAAGCTGTTATTCTGGAGATTGAGAACACTGAGGAAG GACAAATTGGCCAAAGACGGGGAAATTGTGCCTTGAAGTTGCAAATTAGGAAGATCCAAGGCA Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
|
| CRT0137 | M82 sp+ | CTG0137-24 | CGR0137-24 | CRT0137-4-10-3-1 (T3 ) |
-1 bp/-1 bp
Is tDNA present: No
Mutation sequence: GTGTTGGAGGAATGGGACCTGTTAATTGATTATCTCTCAAGGATAAAAATGCAAGCTGGCTCAGATTACCGACCTCCGTT GGAATGTTGCCGCTGACTCTATTCCCAGACAAACTGAAGTTCATCATTTTTGTGGCATTTCCAACAGAAGGGGGGATTAT ACCGGTGAGGCTATTTTTCCTGAGATTTAAGACTCTGAGTTGGGGTACATACCATGGCCCTCTCCACATTTCACCCAATG AAATTACTTCAACTCTACGGTTTTGAAATAGACTTGTTGGTATACTTCCGTTGAGCTGATTGTTTTTAACATCAATCACT CGCAAGCGAGGCAGGTGACCAAGTCCTAAGGGATGCCACCGTGGAAGCTGTTATTCTGGAGATTGAGAACACTGAGGAAG GACAAATTGGCCAAAGACGGGGAAATTGTGCCTTGAAGTTGCAAATTAGGAAGATCCAAGGCA Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
|
| CRT0137 | M82 sp+ | CTG0137-24 | CGR0137-24 | CRT0137-4-10-6 (T2 ) |
-1 bp/-1 bp
Is tDNA present: Yes
Mutation sequence: GTGTTGGAGGAATGGGACCTGTTAATTGATTATCTCTCAAGGATAAAAATGCAAGCTGGCTCAGATTACCGACCTCCGTT GGAATGTTGCCGCTGACTCTATTCCCAGACAAACTGAAGTTCATCATTTTTGTGGCATTTCCAACAGAAGGGGGGATTAT ACCGGTGAGGCTATTTTTCCTGAGATTTAAGACTCTGAGTTGGGGTACATACCATGGCCCTCTCCACATTTCACCCAATG AAATTACTTCAACTCTACGGTTTTGAAATAGACTTGTTGGTATACTTCCGTTGAGCTGATTGTTTTTAACATCAATCACT CGCAAGCGAGGCAGGTGACCAAGTCCTAAGGGATGCCACCGTGGAAGCTGTTATTCTGGAGATTGAGAACACTGAGGAAG GACAAATTGGCCAAAGACGGGGAAATTGTGCCTTGAAGTTGCAAATTAGGAAGATCCAAGGCA Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
|
| CRT0137 | M82 sp+ | CTG0137-24 | CGR0137-24 | CRT0137-4-10-6-1 (T3 ) |
-1 bp/-1 bp
Is tDNA present: No
Mutation sequence: GTGTTGGAGGAATGGGACCTGTTAATTGATTATCTCTCAAGGATAAAAATGCAAGCTGGCTCAGATTACCGACCTCCGTT GGAATGTTGCCGCTGACTCTATTCCCAGACAAACTGAAGTTCATCATTTTTGTGGCATTTCCAACAGAAGGGGGGATTAT ACCGGTGAGGCTATTTTTCCTGAGATTTAAGACTCTGAGTTGGGGTACATACCATGGCCCTCTCCACATTTCACCCAATG AAATTACTTCAACTCTACGGTTTTGAAATAGACTTGTTGGTATACTTCCGTTGAGCTGATTGTTTTTAACATCAATCACT CGCAAGCGAGGCAGGTGACCAAGTCCTAAGGGATGCCACCGTGGAAGCTGTTATTCTGGAGATTGAGAACACTGAGGAAG GACAAATTGGCCAAAGACGGGGAAATTGTGCCTTGAAGTTGCAAATTAGGAAGATCCAAGGCA Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
|
| CRT0137 | M82 sp+ | CTG0137-24 | CGR0137-24 | CRT0137-4-2 (T1 ) |
-1 bp/-1 bp
Is tDNA present: No
Mutation sequence: GTGTTGGAGGAATGGGACCTGTTAATTGATTATCTCTCAAGGATAAAAATGCAAGCTGGCTCAGATTACCGACCTCCGTT GGAATGTTGCCGCTGACTCTATTCCCAGACAAACTGAAGTTCATCATTTTTGTGGCATTTCCAACAGAAGGGGGGATTAT ACCGGTGAGGCTATTTTTCCTGAGATTTAAGACTCTGAGTTGGGGTACATACCATGGCCCTCTCCACATTTCACCCAATG AAATTACTTCAACTCTACGGTTTTGAAATAGACTTGTTGGTATACTTCCGTTGAGCTGATTGTTTTTAACATCAATCACT CGCAAGCGAGGCAGGTGACCAAGTCCTAAGGGATGCCACCGTGGAAGCTGTTATTCTGGAGATTGAGAACACTGAGGAAG GACAAATTGGCCAAAGACGGGGAAATTGTGCCTTGAAGTTGCAAATTAGGAAGATCCAAGGCA Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
|
| CRT0137 | M82 sp+ | CTG0137-24 | CGR0137-24 | CRT0137-4-2-2 (T2 ) |
-1 bp/-1 bp
Is tDNA present: Yes
Mutation sequence: GTGTTGGAGGAATGGGACCTGTTAATTGATTATCTCTCAAGGATAAAAATGCAAGCTGGCTCAGATTACCGACCTCCGTT GGAATGTTGCCGCTGACTCTATTCCCAGACAAACTGAAGTTCATCATTTTTGTGGCATTTCCAACAGAAGGGGGGATTAT ACCGGTGAGGCTATTTTTCCTGAGATTTAAGACTCTGAGTTGGGGTACATACCATGGCCCTCTCCACATTTCACCCAATG AAATTACTTCAACTCTACGGTTTTGAAATAGACTTGTTGGTATACTTCCGTTGAGCTGATTGTTTTTAACATCAATCACT CGCAAGCGAGGCAGGTGACCAAGTCCTAAGGGATGCCACCGTGGAAGCTGTTATTCTGGAGATTGAGAACACTGAGGAAG GACAAATTGGCCAAAGACGGGGAAATTGTGCCTTGAAGTTGCAAATTAGGAAGATCCAAGGCA Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
|
| CRT0137 | M82 sp+ | CTG0137-24 | CGR0137-24 | CRT0137-4-2-2-2 (T3 ) |
-1 bp/-1 bp
Is tDNA present: Yes
Mutation sequence: GTGTTGGAGGAATGGGACCTGTTAATTGATTATCTCTCAAGGATAAAAATGCAAGCTGGCTCAGATTACCGACCTCCGTT GGAATGTTGCCGCTGACTCTATTCCCAGACAAACTGAAGTTCATCATTTTTGTGGCATTTCCAACAGAAGGGGGGATTAT ACCGGTGAGGCTATTTTTCCTGAGATTTAAGACTCTGAGTTGGGGTACATACCATGGCCCTCTCCACATTTCACCCAATG AAATTACTTCAACTCTACGGTTTTGAAATAGACTTGTTGGTATACTTCCGTTGAGCTGATTGTTTTTAACATCAATCACT CGCAAGCGAGGCAGGTGACCAAGTCCTAAGGGATGCCACCGTGGAAGCTGTTATTCTGGAGATTGAGAACACTGAGGAAG GACAAATTGGCCAAAGACGGGGAAATTGTGCCTTGAAGTTGCAAATTAGGAAGATCCAAGGCA Mutation alignment: CRISPR-generated mutation natural variation gRNA exon |
This database is supported by NSF (IOS-1546625) and hosted by BTI.
